Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942050.1_cds_XP_016485660.1_76569
CDS Infomation

[gene=LOC107806063] [db_xref=GeneID:107806063] [protein=protein IQ-DOMAIN 31-like] [protein_id=XP_016485660.1] [location=join(41763..41837,42252..42542,43046..43249,43779..43829,44954..46004,46597..46628)] [gbkey=CDS]
Sequence

ATGGGGAAATCTCCGGCCAAATGGATCAAGGCTGTGCTTTTTGGCAAGAAATCATCCAAG
TCTCATTTATCTAAGGATGTTACGGGTGAGAAAAAATCGTCTGCAAAAGCACCATTGGGG
GATCTAGCTCTGAATTCACCAACTTTGGATCCACCAGTTCAGAATTTGGATAGCGGTGGT
GAGTGTGATCAGGCTGGATTGGAAAAAGGGACAAGCACTGACTTTGCATGCGAAACCGCC
TCACTATCTTCTGCAACACACGAAGCAGATCCGCATGTGAAGGGGGAAATTTTCTCAGAT
GATGCTGAGATGGAAAGACTAGAGCATGCTGCCACCAAAGCACAAGCAGCCTTTAGGGGT
TACTTGGCTCGTCGGGCTTTTCGAGCTCTCAAAGGCATCATAAGGCTACAAGCACTTATT
CGTGGACACTTGGTTAGGAGGCAAGCAGTTGCTACTCTACGCTGCATGCAGGCGATTGTC
AGGATTCAGGCATTAGCTCGTGGTCAAAGTGTTAGACTCTTACATTCTGGGAATCAGCTG
GTTAGAAAGTATAGTTTTGGAGAACTTAAGAATCCTGAGCAGAGGCCTTCAAAACTGACA
GCTAGTGCATTTCCACATAAGCTACTTATGGCAGTGCCAACAGCCATGCCCTTGAGCCTT
CAGTATGATGCGTGTGAACCTAATTCAGCTTGGCAATGGCTTGAACGATGGTCACTATCT
CGGTTTTGGGAACCACTTCCACAACCAAAGAAAGTTGTTGAAGCAAAGTCGCAGAAGAAA
CAGGGTAACAAGCAGAGTGTTGAAACAGAAGTAGTAAGATCAAAACGAAGTGTCAAGAAG
GTTCTTACATCAGCAAATGGAGATGCTTATGCCGTAAGTTCCTCTGAACCAGAAAAAGCT
AAACGTAACCCAAGGAAATTCTCACATCCTCACATAGAGCCAGTGCCGGATCAGCCTCAA
AATGAACTTGAGAAAGTCAAGCGCAATTTAAGAAAAGTTTCTGCAGCTTTGGCAACACCT
TCAGAAAGGACAGAAACAGAAACGGAAAAGGTACAACAAACTCCTAATCTGGCTCAGGCT
CAAGCTCAAGCTCAAGCTCAAGCTCAAGCTCAAGCTAAAACATCAAAATCCTCAGCTCCA
GATGTTGAACAAATAGTGGTTAATTCTTCTGAGAAAACGAGTGATTCAGCTCCTGAAATT
GAGAAATTGGCTGTAACTGAAGCTCCTTTACCTGTAGCAGTGGATGAACCAAGTAATGAA
CTGCTTGATCATCCTACCACTAAGCAACAGCAATTGGAGGATGTTGGGAACACTGCAAAC
AGCCCAGTCGTCAACGAGGAGCTTAGCTCGATGGAAGATCACGCTGCCAAAGAAAGAACT
AGGAGGAGGAAATCTCTTCCCACCAAGCAGGAGAATTCTGAGAATATTTCACAGAATACA
CCAAACGTGCCTAGTTATATGGCTGCCACTCAATCTGCTAAGGCAAAGCTTAAAGCTCAA
GGATCTGCTAAGGTAAGTGAAGATGGAGCTGAAAATGGTTTTGTTCGGCGTCATTCTCTA
CCTTCCTCTACCAATGGCAAATTCAACACATCGTCACCTCGAGTGCAAAGGCCAGTGCAA
GCAAATGGAAAAGGTGGAAACAAGAACAGACCAATGTCATCCTCTAAAGATGAAAAGGTG
CTTCACCCTGGTTGGAAGAGATGA

Peptide Sequence

PEP ID

XP_016485660.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tabacum]
Sequence

MGKSPAKWIKAVLFGKKSSKSHLSKDVTGEKKSSAKAPLGDLALNSPTLDPPVQNLDSGG
ECDQAGLEKGTSTDFACETASLSSATHEADPHVKGEIFSDDAEMERLEHAATKAQAAFRG
YLARRAFRALKGIIRLQALIRGHLVRRQAVATLRCMQAIVRIQALARGQSVRLLHSGNQL
VRKYSFGELKNPEQRPSKLTASAFPHKLLMAVPTAMPLSLQYDACEPNSAWQWLERWSLS
RFWEPLPQPKKVVEAKSQKKQGNKQSVETEVVRSKRSVKKVLTSANGDAYAVSSSEPEKA
KRNPRKFSHPHIEPVPDQPQNELEKVKRNLRKVSAALATPSERTETETEKVQQTPNLAQA
QAQAQAQAQAQAKTSKSSAPDVEQIVVNSSEKTSDSAPEIEKLAVTEAPLPVAVDEPSNE
LLDHPTTKQQQLEDVGNTANSPVVNEELSSMEDHAAKERTRRRKSLPTKQENSENISQNT
PNVPSYMAATQSAKAKLKAQGSAKVSEDGAENGFVRRHSLPSSTNGKFNTSSPRVQRPVQ
ANGKGGNKNRPMSSSKDEKVLHPGWKR

Transcript Sequence

Gene sequence data has not been registered.